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ibsB putative toxic peptide IbsB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 7751626, updated on 3-Dec-2024

Summary

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Official Symbol
ibsB
Official Full Name
putative toxic peptide IbsB
Primary source
ECOCYC:G0-10632
Locus tag
b4668
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4483
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Genomic context

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Sequence:
NC_000913.3 (2153681..2153737, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein-serine/threonine phosphatase PphC Neighboring gene IPR002035 domain-containing protein YegL Neighboring gene ncRNA Neighboring gene toxic peptide IbsA Neighboring gene ncRNA Neighboring gene multidrug efflux pump membrane fusion protein MdtA Neighboring gene multidrug efflux pump RND permease subunit MdtB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hydrophobic peptides: novel regulators within bacterial membrane. Alix E, et al. Mol Microbiol, 2009 Apr. PMID 19210615
  2. Repression of small toxic protein synthesis by the Sib and OhsC small RNAs. Fozo EM, et al. Mol Microbiol, 2008 Dec. PMID 18710431, Free PMC Article
  3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  4. Small membrane proteins found by comparative genomics and ribosome binding site models. Hemm MR, et al. Mol Microbiol, 2008 Dec. PMID 19121005, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
putative toxic peptide IbsB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2153681..2153737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002791248.1 putative toxic peptide IbsB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_002791248.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    C1P608
Nucleotide Protein
Heading Accession and Version

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