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HMPREF9448_RS09200 N-6 DNA methylase [ Barnesiella intestinihominis YIT 11860 ]

Gene ID: 77849108, updated on 11-Dec-2024

Summary

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Gene symbol
HMPREF9448_RS09200
Gene description
N-6 DNA methylase
Locus tag
HMPREF9448_RS09200
Gene type
protein coding
Organism
Barnesiella intestinihominis YIT 11860 (strain: YIT 11860, type-material: type strain of Barnesiella intestinihominis)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella
Old locus tag
HMPREF9448_01883
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Genomic context

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NZ_JH815205.1Genomic Context describing neighboring genes Neighboring gene sigma-54 dependent transcriptional regulator Neighboring gene ATP-binding protein Neighboring gene tetracycline resistance ribosomal protection protein Tet(Q) Neighboring gene DUF1896 domain-containing protein Neighboring gene DUF3945 domain-containing protein Neighboring gene type IA DNA topoisomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JH815205.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Combinational variation of restriction modification specificities in Lactococcus lactis. Schouler C, et al. Mol Microbiol, 1998 Apr. PMID 9593305
  2. A type IC restriction-modification system in Lactococcus lactis. Schouler C, et al. J Bacteriol, 1998 Jan. PMID 9440532, Free PMC Article
  3. The specificity of sty SKI, a type I restriction enzyme, implies a structure with rotational symmetry. Thorpe PH, et al. Nucleic Acids Res, 1997 May 1. PMID 9108149, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
N-6 DNA methylase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JH815205.1 Reference assembly

    Range
    85169..90985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004291462.1 MULTISPECIES: N-6 DNA methylase [Pseudomonadati]

    See identical proteins and their annotated locations for WP_004291462.1

    UniProtKB/TrEMBL
    A0A078RWN6, A0A0K2HGK4, A0A0P0GSK4, A0A139LMR5, A0A174MJA7, A0A174S427, A0A174SAZ0, A0A1C5Y841, A0A1F0I447, A0A1M5DKY3, A0A1M6FZZ8, A0A1Y3QWH5, A0A1Y4GLX2, A0A1Y4JMA4, A0A1Y4Q2A9, A0A285SHI1, A0A2D3NEC8, A0A373ZNY0, A0A374URZ6, A0A374V6E9, A0A374WPC1, A0A379MSJ7, A0A380Z7H4, A0A396LZE0, A0A3A5S587, A0A3A5SBX6, A0A3A5TIL6, A0A3A5YRX9, A0A3A5YXP4, A0A3A5Z2P8, A0A3D8HGT9, A0A3E4TA89, A0A3E4ZJ37, A0A3L7Z1V3, A0A3L7ZN23, A0A3L7ZY70, A0A3R6RFC3, A0A412C763, A0A412CRT5, A0A412FEJ7, A0A414GC39, A0A414R6M8, A0A449I6G5, A0A496C6T7, A0A496CXR3, A0A4Q0IZZ9, A0A4Q0TYK4, A0A5B3GFJ7, A0A6L6N1A0, A0A6N4H8A2, A0A7D7BM57, A0A7J0AN93, A0A7J4YIF3, A0A7W6MYV8, A0A7X5YFI9, A0AA37ND40, B3C7C7, B3JIW5, B5D3E7, D0TQ36, D7J969, E4MAV8, F3PMZ6, F7M261, I9AB67, K0XH77, K5ZVL2, Q56VE3, Q650D5, W0EW07
    Conserved Domains (5) summary
    smart00490
    Location:1512 → 1572
    HELICc; helicase superfamily c-terminal domain
    smart00787
    Location:1811 → 1898
    Spc7; Spc7 kinetochore protein
    COG0827
    Location:20 → 297
    YtxK; Adenine-specific DNA methylase [Replication, recombination and repair]
    COG4646
    Location:631 → 1102
    COG4646; Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]
    NF033839
    Location:395 → 630
    PspC_subgroup_2; pneumococcal surface protein PspC, LPXTG-anchored form
Nucleotide Protein
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