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HMPREF0673_RS06190 U32 family peptidase [ Leyella stercorea DSM 18206 ]

Gene ID: 78337098, updated on 29-Jul-2024

Summary

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Gene symbol
HMPREF0673_RS06190
Gene description
U32 family peptidase
Locus tag
HMPREF0673_RS06190
Gene type
protein coding
Organism
Leyella stercorea DSM 18206 (strain: DSM 18206, nat-host: Homo sapiens, type-material: type strain of Prevotella stercorea)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Leyella
Old locus tag
HMPREF0673_01423
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Genomic context

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NZ_JH379423.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene isoleucine--tRNA ligase Neighboring gene homoserine O-succinyltransferase Neighboring gene zinc ribbon domain-containing protein Neighboring gene YqaA family protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JH379423.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Role of bacterial proteinases in matrix destruction and modulation of host responses. Potempa J, et al. Periodontol 2000, 2000 Oct. PMID 11276866
  2. Sequence analysis and characterization of the Porphyromonas gingivalis prtC gene, which expresses a novel collagenase activity. Kato T, et al. J Bacteriol, 1992 Jun. PMID 1317840, Free PMC Article
  3. Biogenesis and iron-dependency of ribosomal RNA hydroxylation. Kimura S, et al. Nucleic Acids Res, 2017 Dec 15. PMID 29069499, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
U32 family peptidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JH379423.1 Reference assembly

    Range
    20189..22105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_007899566.1 U32 family peptidase [Leyella stercorea]

    See identical proteins and their annotated locations for WP_007899566.1

    UniProtKB/TrEMBL
    G6AXR7
    Conserved Domains (2) summary
    COG0826
    Location:5 → 358
    PrtC; Collagenase-like protease, PrtC family [Posttranslational modification, protein turnover, chaperones]
    pfam12392
    Location:450 → 507
    DUF3656; Collagenase
Nucleotide Protein
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