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TTHERM_01289110 60S ribosomal protein L15 [ Tetrahymena thermophila SB210 ]

Gene ID: 7835734, updated on 28-Dec-2023

Summary

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Gene symbol
TTHERM_01289110
Gene description
60S ribosomal protein L15
Locus tag
TTHERM_01289110
Gene type
protein coding
RNA name
60S ribosomal protein L15
RefSeq status
PROVISIONAL
Organism
Tetrahymena thermophila SB210 (strain: SB210)
Lineage
Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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Genomic context

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See TTHERM_01289110 in Genome Data Viewer
Exon count:
2

NW_002476176.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein Neighboring gene tRNA-dihydrouridine synthase Neighboring gene eukaryotic aspartyl protease Neighboring gene DHHC zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002476176.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. Eisen JA, et al. PLoS Biol, 2006 Sep. PMID 16933976, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
60S ribosomal protein L15
XP_001029813.1
  • encoded by transcript TTHERM_01289110A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002476176.1 Reference assembly

    Range
    27790..28959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001029813.3 → XP_001029813.1  60S ribosomal protein L15 [Tetrahymena thermophila SB210]

    See identical proteins and their annotated locations for XP_001029813.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q22A30
    Conserved Domains (1) summary
    PTZ00026
    Location:1 → 204
    PTZ00026; 60S ribosomal protein L15; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q22A30.1

Gene LinkOut

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Research Materials