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I6G65_RS18645 RNA methyltransferase [ Sphingomonas paucimobilis ]

Gene ID: 78529229, updated on 12-Dec-2024

Summary

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Gene symbol
I6G65_RS18645
Gene description
RNA methyltransferase
Locus tag
I6G65_RS18645
Gene type
protein coding
Organism
Sphingomonas paucimobilis (strain: FDAARGOS_908, culture-collection: DSM:1098, type-material: type strain of Sphingomonas paucimobilis)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas
Old locus tag
I6G65_18650
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Genomic context

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NZ_CP065670.1Genomic Context describing neighboring genes Neighboring gene peptide deformylase Neighboring gene DNA recombination protein RmuC Neighboring gene HPr family phosphocarrier protein Neighboring gene PTS sugar transporter subunit IIA Neighboring gene RNase adapter RapZ Neighboring gene HPr kinase/phosphorylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP065670.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An enzyme with a deep trefoil knot for the active-site architecture. Nureki O, et al. Acta Crystallogr D Biol Crystallogr, 2002 Jul. PMID 12077432
  2. SPOUT: a class of methyltransferases that includes spoU and trmD RNA methylase superfamilies, and novel superfamilies of predicted prokaryotic RNA methylases. Anantharaman V, et al. J Mol Microbiol Biotechnol, 2002 Jan. PMID 11763972
  3. Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases. Tkaczuk KL, et al. BMC Bioinformatics, 2007 Mar 5. PMID 17338813, Free PMC Article
  4. Complete genome sequence of Sphingomonas paucimobilis AIMST S2, a xenobiotic-degrading bacterium. Ravintheran SK, et al. Sci Data, 2019 Nov 25. PMID 31767854, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA methyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP065670.1 Reference assembly

    Range
    3645204..3646016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_007403262.1 MULTISPECIES: RNA methyltransferase [Sphingomonas]

    See identical proteins and their annotated locations for WP_007403262.1

    UniProtKB/TrEMBL
    A0A0C9MQG6, A0A411LFT9, A0A430CIM7
    Conserved Domains (1) summary
    COG0566
    Location:10 → 265
    SpoU; tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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