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Zfp972 zinc finger protein 972 [ Mus musculus (house mouse) ]

Gene ID: 78703, updated on 27-Nov-2024

Summary

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Official Symbol
Zfp972provided by MGI
Official Full Name
zinc finger protein 972provided by MGI
Primary source
MGI:MGI:1925953
See related
Ensembl:ENSMUSG00000074529 AllianceGenome:MGI:1925953
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C330013J21Rik
Summary
Is expressed in heart ventricle; limb; nervous system; and sensory organ. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Zfp972 in Genome Data Viewer
Location:
2 H4; 2 99.57 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (177544857..177567443, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (177903064..177925650, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_06690 Neighboring gene predicted gene 14325 Neighboring gene STARR-seq mESC enhancer starr_06691 Neighboring gene STARR-seq mESC enhancer starr_06692 Neighboring gene STARR-seq mESC enhancer starr_06693 Neighboring gene STARR-seq mESC enhancer starr_06694 Neighboring gene ribosomal protein S8, pseudogene 5 Neighboring gene STARR-seq mESC enhancer starr_06695 Neighboring gene zinc finger protein 1003 Neighboring gene predicted gene 14326 Neighboring gene STARR-seq mESC enhancer starr_06696 Neighboring gene predicted gene 14428

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
  2. A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Yokoyama S, et al. Dev Cell, 2009 Dec. PMID 20059953, Free PMC Article
  3. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  4. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article
  5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC78703

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183135.1 → NP_898958.1  uncharacterized protein LOC78703

    Status: VALIDATED

    Source sequence(s)
    AK021199, AL935320, CD543726
    Consensus CDS
    CCDS84597.1
    UniProtKB/TrEMBL
    A2AW64
    Related
    ENSMUSP00000104562.3, ENSMUST00000108934.10
    Conserved Domains (1) summary
    pfam01352
    Location:4 → 40
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    177544857..177567443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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