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RPL15 ribosomal protein RPL15 [ Toxoplasma gondii ME49 ]

Gene ID: 7896120, updated on 26-Oct-2024

Summary

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Gene symbol
RPL15
Gene description
ribosomal protein RPL15
Locus tag
TGME49_228470
See related
ToxoDB:TGME49_228470; VEuPathDB:TGME49_228470
Gene type
protein coding
RNA name
ribosomal protein RPL15
RefSeq status
PROVISIONAL
Organism
Toxoplasma gondii ME49 (strain: ME49)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma
Old locus tag
TGME49_028470
Orthologs
all
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Genomic context

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See RPL15 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_031478.1 (295090..298043)

Chromosome X - NC_031478.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031478.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ribosomal protein RPL15
XP_002366469.1
  • encoded by transcript TGME49_228470

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031478.1 Reference assembly

    Range
    295090..298043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002366428.1 → XP_002366469.1  ribosomal protein RPL15 [Toxoplasma gondii ME49]

    See identical proteins and their annotated locations for XP_002366469.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A086KCY8, A0A086KKL1, A0A086L6H4, A0A086M9Z4, A0A086QBP3, A0A086QJN9, A0A0F7V1F6, A0A0N5EDF4, A0A125YX54, A0A125YX57, A0A139XXH6, A0A151H6Z2, A0A2G8Y6N0, A0A2T6J035, A0A425I610, A0A7J6K0A3, B6KF46, B9PN66, B9Q8H1, S7UX42, S8G6M5
    Conserved Domains (1) summary
    PTZ00026
    Location:1 → 205
    PTZ00026; 60S ribosomal protein L15; Provisional
Nucleotide Protein
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