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CTC_RS15065 sigma 54-interacting transcriptional regulator [ Clostridium tetani E88 ]

Gene ID: 79382524, updated on 6-Oct-2023

Summary

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Gene symbol
CTC_RS15065
Gene description
sigma 54-interacting transcriptional regulator
Locus tag
CTC_RS15065
Gene type
protein coding
Organism
Clostridium tetani E88 (strain: Massachusetts, substrain: E88)
Lineage
Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
Old locus tag
CTC00556; CTC_00556
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Genomic context

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Sequence:
NC_004557.1 (574841..576571, complement)

NC_004557.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene sigma-70 family RNA polymerase sigma factor Neighboring gene DUF4367 domain-containing protein Neighboring gene ABC transporter substrate-binding protein Neighboring gene ABC transporter substrate-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004557.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action. Chaney M, et al. Genes Dev, 2001 Sep 1. PMID 11544185, Free PMC Article
  2. Domain architectures of sigma54-dependent transcriptional activators. Studholme DJ, et al. J Bacteriol, 2003 Mar. PMID 12618438, Free PMC Article
  3. The genome sequence of Clostridium tetani, the causative agent of tetanus disease. Bruggemann H, et al. Proc Natl Acad Sci U S A, 2003 Feb 4. PMID 12552129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
sigma 54-interacting transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004557.1 Reference assembly

    Range
    574841..576571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011098841.1 sigma 54-interacting transcriptional regulator [Clostridium tetani]

    See identical proteins and their annotated locations for WP_011098841.1

    UniProtKB/TrEMBL
    Q898A9
    Conserved Domains (2) summary
    COG3829
    Location:86 → 576
    RocR; Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]
    pfam01590
    Location:4 → 104
    GAF; GAF domain
Nucleotide Protein
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