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PGV62_RS00795 helix-turn-helix domain-containing protein [ Alistipes finegoldii ]

Gene ID: 79836115, updated on 9-Jan-2025

Summary

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Gene symbol
PGV62_RS00795
Gene description
helix-turn-helix domain-containing protein
Locus tag
PGV62_RS00795
Gene type
protein coding
Organism
Alistipes finegoldii (strain: TM12-21A, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
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Genomic context

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NZ_JAQENJ0100000.1Genomic Context describing neighboring genes Neighboring gene cyclophilin-like fold protein Neighboring gene MFS transporter Neighboring gene alpha/beta hydrolase Neighboring gene AraC family transcriptional regulator Neighboring gene efflux RND transporter periplasmic adaptor subunit Neighboring gene efflux RND transporter permease subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JAQENJ010000001.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural classification of HTH DNA-binding domains and protein-DNA interaction modes. Wintjens R, et al. J Mol Biol, 1996 Sep 20. PMID 8831795
  2. Molecular evolution of helix-turn-helix proteins. Rosinski JA, et al. J Mol Evol, 1999 Sep. PMID 10473770
  3. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
helix-turn-helix domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JAQENJ010000001.1 Reference assembly

    Range
    199839..200732
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_014775153.1 MULTISPECIES: helix-turn-helix domain-containing protein [Alistipes]

    UniProtKB/TrEMBL
    A0A1Q6FX08, A0A5B5VSL8, I3YKP5
    Conserved Domains (1) summary
    pfam12833
    Location:218 → 296
    HTH_18; Helix-turn-helix domain
Nucleotide Protein
Heading Accession and Version