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PG862_RS13605 bifunctional lytic transglycosylase/C40 family peptidase [ Clostridium fessum ]

Gene ID: 79841656, updated on 16-Dec-2024

Summary

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Gene symbol
PG862_RS13605
Gene description
bifunctional lytic transglycosylase/C40 family peptidase
Locus tag
PG862_RS13605
Gene type
protein coding
Organism
Clostridium fessum (strain: AM88-09pH10A, nat-host: Homo sapiens)
Lineage
Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
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Genomic context

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NZ_JAQEQF0100000.1Genomic Context describing neighboring genes Neighboring gene antirestriction protein ArdA Neighboring gene conjugal transfer protein Neighboring gene ATP-binding protein Neighboring gene CD3337/EF1877 family mobilome membrane protein Neighboring gene conjugal transfer protein Neighboring gene ABC-F family ATP-binding cassette domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JAQEQF010000012.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lytic transglycosylases. Höltje JV. EXS, 1996. PMID 8765311
  2. The catalytic domain of a bacterial lytic transglycosylase defines a novel class of lysozymes. Thunnissen AM, et al. Proteins, 1995 Jul. PMID 7479697
  3. Evolutionary lines of cysteine peptidases. Barrett AJ, et al. Biol Chem, 2001 May. PMID 11517925
  4. Evolutionary history, structural features and biochemical diversity of the NlpC/P60 superfamily of enzymes. Anantharaman V, et al. Genome Biol, 2003. PMID 12620121, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
bifunctional lytic transglycosylase/C40 family peptidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JAQEQF010000012.1 Reference assembly

    Range
    65269..66270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_016440024.1 MULTISPECIES: bifunctional lytic transglycosylase/C40 family peptidase [Bacillota]

    See identical proteins and their annotated locations for WP_016440024.1

    UniProtKB/TrEMBL
    A0A2N5PGS0, A0A374NVB9, A0A3E5GDZ3, A0A3R6MWP8, A0A412ERK9, A0AAW4WNR9
    Conserved Domains (2) summary
    pfam00877
    Location:223 → 329
    NLPC_P60; NlpC/P60 family
    pfam13702
    Location:46 → 201
    Lysozyme_like; Lysozyme-like