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ligA protocatechuate 4,5-dioxygenase subunit alpha [ Aurantimicrobium minutum ]

Gene ID: 80452798, updated on 3-May-2023

Summary

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Gene symbol
ligA
Gene description
protocatechuate 4,5-dioxygenase subunit alpha
Locus tag
AUMI_RS08250
Gene type
protein coding
Organism
Aurantimicrobium minutum (strain: KNC, type-material: type strain of Aurantimicrobium minutum)
Lineage
Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; Aurantimicrobium
Old locus tag
AUMI_19390
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Genomic context

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Location:
chromosome: sequence1

sequence1 - NZ_AP017457.1Genomic Context describing neighboring genes Neighboring gene Gfo/Idh/MocA family oxidoreductase Neighboring gene class III extradiol dioxygenase subunit beta Neighboring gene amidohydrolase family protein Neighboring gene amidohydrolase family protein Neighboring gene 4-oxalomesaconate tautomerase Neighboring gene 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AP017457.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6. Hara H, et al. J Bacteriol, 2003 Jan. PMID 12486039, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protocatechuate 4,5-dioxygenase subunit alpha
WP_096381933.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AP017457.1 Reference assembly

    Range
    990027..990425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_096381933.1 protocatechuate 4,5-dioxygenase subunit alpha [Aurantimicrobium minutum]

    UniProtKB/TrEMBL
    A0A173LY88
    Conserved Domains (1) summary
    cl06673
    Location:3 → 130
    Extradiol_Dioxygenase_3A_like; Subunit A of Class III extradiol dioxygenases
Nucleotide Protein
Heading Accession and Version

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