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LOC8070647 ribulose bisphosphate carboxylase small chain, chloroplastic [ Sorghum bicolor (sorghum) ]

Gene ID: 8070647, updated on 18-Aug-2023

Summary

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Gene symbol
LOC8070647
Gene description
ribulose bisphosphate carboxylase small chain, chloroplastic
Locus tag
SORBI_3005G042000
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
Also known as
RbcS
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Genomic context

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See LOC8070647 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 5 NC_012874.2 (3876172..3877381, complement)

Chromosome 5 - NC_012874.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110435520 Neighboring gene uncharacterized LOC8058564 Neighboring gene WUSCHEL-related homeobox 3B Neighboring gene mucin-19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012874.2 Chromosome 5 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional incorporation of sorghum small subunit increases the catalytic turnover rate of Rubisco in transgenic rice. Ishikawa C, et al. Plant Physiol, 2011 Jul. PMID 21562335, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribulose bisphosphate carboxylase small chain, chloroplastic
Names
ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012874.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    3876172..3877381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002450259.2 → XP_002450304.1  ribulose bisphosphate carboxylase small chain, chloroplastic

    See identical proteins and their annotated locations for XP_002450304.1

    UniProtKB/TrEMBL
    A0A921QUU3, C5Y519, E3WDK7
    Conserved Domains (3) summary
    PLN02289
    Location:1 → 166
    PLN02289; ribulose-bisphosphate carboxylase small chain
    cd03527
    Location:56 → 165
    RuBisCO_small; Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco ...
    pfam12338
    Location:8 → 33
    RbcS; Ribulose-1,5-bisphosphate carboxylase small subunit
Nucleotide Protein
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