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PF3D7_1104000 phenylalanine--tRNA ligase beta subunit [ Plasmodium falciparum 3D7 ]

Gene ID: 810604, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1104000
Gene description
phenylalanine--tRNA ligase beta subunit
Locus tag
PF3D7_1104000
See related
PlasmoDB:PF3D7_1104000; VEuPathDB:PF3D7_1104000
Gene type
protein coding
RNA name
phenylalanine--tRNA ligase beta subunit
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1104000 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Sequence:
Chromosome: 11; NC_037282.1 (175608..177778, complement)

Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex subunit 1, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene syntaxin, Qa-SNARE family Neighboring gene chromatin remodeling protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037282.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteome mapping of Plasmodium: identification of the P. yoelii remodellome. Siau A, et al. Sci Rep, 2016 Aug 9. PMID 27503796, Free PMC Article
  2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Component Evidence Code Pubs
located_in intracellular anatomical structure ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
phenylalanine--tRNA ligase beta subunit
XP_001347727.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037282.1 Reference assembly

    Range
    175608..177778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001347691.1 → XP_001347727.1  phenylalanine--tRNA ligase beta subunit [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001347727.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V4G7, A0A024W590, A0A024X724, A0A0L7KAM4, A0A0L7M6M4, Q8IIW2, W4IF35, W4IZG8, W7FB36, W7FWZ2, W7JTS1
    Conserved Domains (1) summary
    PLN02265
    Location:1 → 618
    PLN02265; probable phenylalanyl-tRNA synthetase beta chain
Nucleotide Protein
Heading Accession and Version

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