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PF3D7_1220400 debranching enzyme-associated ribonuclease, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 811248, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1220400
Gene description
debranching enzyme-associated ribonuclease, putative
Locus tag
PF3D7_1220400
See related
PlasmoDB:PF3D7_1220400; VEuPathDB:PF3D7_1220400
Gene type
protein coding
RNA name
debranching enzyme-associated ribonuclease, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1220400 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_037284.1 (816909..818468)

Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene cell cycle associated protein, putative Neighboring gene hypothetical protein Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037284.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
debranching enzyme-associated ribonuclease, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037284.1 Reference assembly

    Range
    816909..818468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350566.1 → XP_001350602.1  debranching enzyme-associated ribonuclease, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350602.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V519, A0A024WM17, A0A0L1I4N7, A0A2I0BYB1, Q8I5K9
    Conserved Domains (2) summary
    pfam04676
    Location:428 → 516
    CwfJ_C_2; Protein similar to CwfJ C-terminus 2
    cl00228
    Location:280 → 416
    HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...
Nucleotide Protein
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