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TOM3 tobamovirus multiplication protein 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814749, updated on 18-Sep-2024

Summary

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Official Symbol
TOM3
Official Full Name
tobamovirus multiplication protein 3
Primary source
TAIR:AT2G02180
Locus tag
AT2G02180
See related
Araport:AT2G02180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5O4.5; F5O4_5; tobamovirus multiplication protein 3
Summary
Necessary for the efficient multiplication of tobamoviruses.
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Genomic context

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See TOM3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Sequence:
Chromosome: 2; NC_003071.7 (560695..563367)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene CCCH-type zinc finger family protein Neighboring gene Remorin family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete inhibition of tobamovirus multiplication by simultaneous mutations in two homologous host genes. Yamanaka T, et al. J Virol, 2002 Mar. PMID 11836427, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_126278.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within viral replication complex formation and maintenance IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
tobamovirus multiplication protein 3
NP_027422.1
  • tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    560695..563367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126278.3 → NP_027422.1  tobamovirus multiplication protein 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_027422.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LF52, Q948X6, Q9ZUM2
    UniProtKB/TrEMBL
    A0A178VPK1, A0A5S9WWK0
    Conserved Domains (1) summary
    pfam06454
    Location:31 → 301
    DUF1084; Protein of unknown function (DUF1084)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZUM2.2

Gene LinkOut

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