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F-box protein (DUF295) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815150, updated on 18-Sep-2024

Summary

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Official Full Name
F-box protein (DUF295)
Primary source
TAIR:AT2G05970
Locus tag
AT2G05970
See related
Araport:AT2G05970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6P5.17; T6P5_17
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (2308651..2309784, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_126610.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
F-box protein (DUF295)
NP_178654.1
  • CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G17565.1); Has 491 Blast hits to 474 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 491; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    2308651..2309784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126610.1 → NP_178654.1  F-box protein (DUF295) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178654.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZUF1
    UniProtKB/TrEMBL
    A0A654ETR5
    Conserved Domains (3) summary
    PLN03215
    Location:8 → 325
    PLN03215; ascorbic acid mannose pathway regulator 1; Provisional
    pfam00646
    Location:9 → 54
    F-box; F-box domain
    pfam03478
    Location:293 → 344
    DUF295; Protein of unknown function (DUF295)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZUF1.1

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