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BSD domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815559, updated on 18-Sep-2024

Summary

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Official Full Name
BSD domain-containing protein
Primary source
TAIR:AT2G10950
Locus tag
AT2G10950
See related
Araport:AT2G10950
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15K19.2; F15K19_2
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (4314243..4317882, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001335361.1
NM_001335362.1
NM_126829.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
BSD domain-containing protein
NP_001318209.1
  • BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 187 Blast hits to 175 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 3; Plants - 134; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    4314243..4317882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335361.1 → NP_001318209.1  BSD domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WXP4, A0A654ESF4, Q9SKH9
    Conserved Domains (1) summary
    smart00751
    Location:139 → 188
    BSD; domain in transcription factors and synapse-associated proteins

  2. NM_001335362.1 → NP_001324750.1  BSD domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WXP4, A0A654ESF4, Q9SKH9
    Conserved Domains (1) summary
    smart00751
    Location:139 → 188
    BSD; domain in transcription factors and synapse-associated proteins

  3. NM_126829.4 → NP_565349.1  BSD domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565349.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WXP4, A0A654ESF4, Q9SKH9
    Conserved Domains (1) summary
    smart00751
    Location:139 → 188
    BSD; domain in transcription factors and synapse-associated proteins
Nucleotide Protein
Heading Accession and Version

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