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SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816158, updated on 18-Sep-2024

Summary

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Official Full Name
SAUR-like auxin-responsive protein family
Primary source
TAIR:AT2G16580
Locus tag
AT2G16580
See related
Araport:AT2G16580
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F1P15.4; F1P15_4; SAUR8; SMALL AUXIN UPREGULATED RNA 8
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (7184422..7187009, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene GLN phosphoribosyl pyrophosphate amidotransferase 1 Neighboring gene mucin Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade. van Mourik H, et al. BMC Plant Biol, 2017 Dec 19. PMID 29258424, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_127209.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to auxin IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SAUR-like auxin-responsive protein family
NP_179248.1
  • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1242 Blast hits to 1227 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1241; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7184422..7187009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127209.2 → NP_179248.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179248.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SI60
    UniProtKB/TrEMBL
    A0A178VY18, A0A654ETB6
    Conserved Domains (1) summary
    PLN03090
    Location:2 → 108
    PLN03090; auxin-responsive family protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SI60.1

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