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hypothetical protein (DUF241) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816213, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF241)
Primary source
TAIR:AT2G17080
Locus tag
AT2G17080
See related
Araport:AT2G17080
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6P23.10; F6P23_10
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (7433183..7434172, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene hypothetical protein (DUF241) Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_127263.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in root development IEA
Inferred from Electronic Annotation
more info
  
involved_in shoot system development IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF241)
NP_179300.1
  • Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17070.1); Has 750 Blast hits to 734 proteins in 87 species: Archae - 2; Bacteria - 37; Metazoa - 79; Fungi - 28; Plants - 534; Viruses - 2; Other Eukaryotes - 68 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7433183..7434172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127263.2 → NP_179300.1  hypothetical protein (DUF241) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179300.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSW3, A0MEM1, Q1PF57
    Conserved Domains (1) summary
    pfam03087
    Location:47 → 260
    DUF241; Arabidopsis protein of unknown function
Nucleotide Protein
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