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PIN1AT peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816316, updated on 18-Sep-2024

Summary

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Official Symbol
PIN1AT
Official Full Name
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
Primary source
TAIR:AT2G18040
Locus tag
AT2G18040
See related
Araport:AT2G18040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''peptidylprolyl cis/trans isomerase; NIMA-interacting 1; NIMA-interacting 1''; peptidylprolyl cis/trans isomerase; PROLYL CIS/TRANS ISOMERASE; T27K22.9; T27K22_9
Summary
phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds
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Genomic context

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See PIN1AT in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (7841940..7843942)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Peptide methionine sulfoxide reductase family protein Neighboring gene miscRNA Neighboring gene histone H1-3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pin1At regulates PIN1 polar localization and root gravitropism. Xi W, et al. Nat Commun, 2016 Jan 21. PMID 26791759, Free PMC Article
  2. Functional conservation of phosphorylation-specific prolyl isomerases in plants. Yao JL, et al. J Biol Chem, 2001 Apr 27. PMID 11118438
  3. Pin1At encoding a peptidyl-prolyl cis/trans isomerase regulates flowering time in Arabidopsis. Wang Y, et al. Mol Cell, 2010 Jan 15. PMID 20129060
  4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Pin1At regulates PIN1 polar localization and root gravitropism.
    Title: Pin1At regulates PIN1 polar localization and root gravitropism.
  2. Pin1At regulates flowering, which is genetically mediated by AGL24 and SOC1.
    Title: Pin1At encoding a peptidyl-prolyl cis/trans isomerase regulates flowering time in Arabidopsis.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_127360.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables peptidyl-prolyl cis-trans isomerase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within gravitropism IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of cell cycle TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within regulation of flower development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of protein localization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
located_in mitochondrion HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
NP_179395.1
  • ''peptidylprolyl cis/trans isomerase, NIMA-interacting 1'' (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7841940..7843942
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127360.4 → NP_179395.1  peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179395.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q42334, Q9SL42
    UniProtKB/TrEMBL
    A0A5S9WYW6, A0A654ETT3
    Conserved Domains (1) summary
    cl29122
    Location:5 → 119
    Rotamase_2; PPIC-type PPIASE domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SL42.1

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