bZIP2 basic leucine-zipper 2 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: bZIP2
Official Full Name: basic leucine-zipper 2
Primary source: TAIR:AT2G18160
Locus tag: AT2G18160
See related: Araport:AT2G18160
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATBZIP2; basic leucine-zipper 2; F8D23.6; F8D23_6; FLORAL TRANSITION AT THE MERISTEM3; FTM3; G-BOX BINDING FACTOR 5; GBF5; TRANSCRIPTION FACTOR GBF5
Summary: Encodes a b-ZIP transcription factor.
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Genomic context

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See bZIP2 in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 1

Sequence:: Chromosome: 2; NC_003071.7 (7898012..7899242, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

Miscellaneous features

Loc: c7899042-7898917 AT2G18160.uORF1

NM_127373.2

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein heterodimerization activity	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: basic leucine-zipper 2

NP_179408.1

basic leucine-zipper 2 (bZIP2); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1913 Blast hits to 1913 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 1825; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

7898012..7899242 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_127373.2 → NP_179408.1 basic leucine-zipper 2 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_179408.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9FVN9, Q9SI15

UniProtKB/TrEMBL

A0A178VSN6, A0A5S9WYX5

Conserved Domains (1) summary

cd14702
Location:32 → 83

bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain