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Ubiquitin-conjugating enzyme family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816375, updated on 18-Sep-2024

Summary

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Official Full Name
Ubiquitin-conjugating enzyme family protein
Primary source
TAIR:AT2G18600
Locus tag
AT2G18600
See related
Araport:AT2G18600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F24H14.5; F24H14_5
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Genomic context

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Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (8073167..8075009, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Major facilitator superfamily protein Neighboring gene Terpenoid synthases superfamily protein Neighboring gene transmembrane protein, putative (DUF677)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_127416.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in protein neddylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Ubiquitin-conjugating enzyme family protein
NP_565440.1
  • Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity, acid-amino acid ligase activity, ATP binding; INVOLVED IN: regulation of protein metabolic process, protein modification process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: RUB1 conjugating enzyme 1 (TAIR:AT4G36800.2); Has 8339 Blast hits to 8336 proteins in 387 species: Archae - 0; Bacteria - 2; Metazoa - 3796; Fungi - 1734; Plants - 1481; Viruses - 20; Other Eukaryotes - 1306 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8073167..8075009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335600.1 → NP_001324430.1  Ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZU75
    UniProtKB/TrEMBL
    A0A178VNF5, A0A5S9WZ23, A0A654EU03
    Conserved Domains (1) summary
    pfam00179
    Location:35 → 171
    UQ_con; Ubiquitin-conjugating enzyme

  2. NM_127416.4 → NP_565440.1  Ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565440.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZU75
    UniProtKB/TrEMBL
    A0A178VNF5, A0A5S9WZ23, A0A654EU03
    Conserved Domains (1) summary
    pfam00179
    Location:35 → 171
    UQ_con; Ubiquitin-conjugating enzyme
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZU75.1

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