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P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816392, updated on 18-Sep-2024

Summary

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Official Full Name
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Primary source
TAIR:AT2G18770
Locus tag
AT2G18770
See related
Araport:AT2G18770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MSF3.15; MSF3_15
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (8134566..8136646)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Calmodulin-binding protein Neighboring gene chromatin remodeling 8 Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene phytochrome B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001335611.1
NM_127433.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables signal recognition particle binding ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
P-loop containing nucleoside triphosphate hydrolases superfamily protein
NP_179467.1
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Signal recognition particle receptor, beta subunit (InterPro:IPR019009); BEST Arabidopsis thaliana protein match is: signal recognition particle binding (TAIR:AT5G05670.1); Has 1043 Blast hits to 1043 proteins in 279 species: Archae - 2; Bacteria - 132; Metazoa - 396; Fungi - 167; Plants - 178; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8134566..8136646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127433.4 → NP_179467.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179467.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VQQ0, Q0WSC4, Q5XVE5, Q9ZV42
    Conserved Domains (1) summary
    cd04105
    Location:56 → 256
    SR_beta; Signal recognition particle receptor, beta subunit (SR-beta), together with SR-alpha, forms the heterodimeric signal recognition particle (SRP)

  2. NM_001335611.1 → NP_001323846.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AY88, Q0WSC4, Q5XVE5
Nucleotide Protein
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