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hypothetical protein (DUF626) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816589, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF626)
Primary source
TAIR:AT2G20625
Locus tag
AT2G20625
See related
Araport:AT2G20625
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F23N11.15; F23N11_15
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (8896154..8897218, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF626) Neighboring gene ncRNA Neighboring gene PP2C induced by AVRRPM1 Neighboring gene protein kinase and Mad3-BUB1-I domain-containing protein Neighboring gene RING/U-box superfamily protein Neighboring gene ralf-like 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001335702.1
NM_127626.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF626)
NP_179654.2
  • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT2G20620.1); Has 62 Blast hits to 62 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8896154..8897218 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127626.2 → NP_179654.2  hypothetical protein (DUF626) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179654.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8S8D8
    Conserved Domains (1) summary
    cl19902
    Location:129 → 174
    DUF626; Protein of unknown function (DUF626)

  2. NM_001335702.1 → NP_001324778.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IVH7, Q8S8D8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8S8D8.1

Gene LinkOut

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