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cell wall protein precursor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816620, updated on 18-Sep-2024

Summary

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Official Full Name
cell wall protein precursor
Primary source
TAIR:AT2G20870
Locus tag
AT2G20870
See related
Araport:AT2G20870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5H14.16; F5H14_16
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (8981927..8982712, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene STRUBBELIG-receptor family 1 Neighboring gene lipoic acid synthase 1 Neighboring gene uncharacterized protein Neighboring gene epidermal patterning factor 1 Neighboring gene Integrase-type DNA-binding superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_127656.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cell wall protein precursor
NP_565490.1
  • cell wall protein precursor, putative; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G28160.1); Has 75 Blast hits to 75 proteins in 18 species: Archae - 0; Bacteria - 27; Metazoa - 5; Fungi - 2; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8981927..8982712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127656.5 → NP_565490.1  cell wall protein precursor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565490.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P47925, Q9SKT2
    UniProtKB/TrEMBL
    A0A654EW61, A6QRC7, Q8LCR9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P47925.2

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