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Papain family cysteine protease [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816682, updated on 18-Sep-2024

Summary

Official Full Name
Papain family cysteine protease
Primary source
TAIR:AT2G21430
Locus tag
AT2G21430
See related
Araport:AT2G21430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3K23.19; F3K23_19
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Genomic context

Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (9171872..9173490, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene vacuolar proton ATPase A2 Neighboring gene IBR domain containing protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene chromatin remodeling 34 Neighboring gene SNF2 domain CLASSY-like protein Neighboring gene ncRNA

General protein information

Preferred Names
Papain family cysteine protease
NP_565512.1
  • Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT4G39090.1); Has 7727 Blast hits to 7665 proteins in 722 species: Archae - 65; Bacteria - 238; Metazoa - 3256; Fungi - 4; Plants - 1824; Viruses - 140; Other Eukaryotes - 2200 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9171872..9173490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127715.4NP_565512.1  Papain family cysteine protease [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565512.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P43295, Q058I7, Q680L1, Q9SJT5
    UniProtKB/TrEMBL
    A0A178VSI2, A0A5S9WZX6
    Conserved Domains (2) summary
    smart00848
    Location:48103
    Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
    pfam00112
    Location:132356
    Peptidase_C1; Papain family cysteine protease