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Alkaline-phosphatase-like family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816786, updated on 18-Sep-2024

Summary

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Official Full Name
Alkaline-phosphatase-like family protein
Primary source
TAIR:AT2G22530
Locus tag
AT2G22530
See related
Araport:AT2G22530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14M13.7; F14M13_7
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Genomic context

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Location:
chromosome: 2
Exon count:
17
Sequence:
Chromosome: 2; NC_003071.7 (9572768..9577616, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncoupling protein 5 Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene uncharacterized protein Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene Kinase interacting (KIP1-like) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_127819.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Alkaline-phosphatase-like family protein
NP_179839.5
  • Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9572768..9577616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127819.6 → NP_179839.5  Alkaline-phosphatase-like family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179839.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VTW9, F4IJJ8
    Conserved Domains (1) summary
    cd16024
    Location:82 → 362
    GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G
Nucleotide Protein
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