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Class I glutamine amidotransferase-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816930, updated on 18-Sep-2024

Summary

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Official Full Name
Class I glutamine amidotransferase-like superfamily protein
Primary source
TAIR:AT2G23970
Locus tag
AT2G23970
See related
Araport:AT2G23970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T29E15.17; T29E15_17
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (10199675..10201095)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Class I glutamine amidotransferase-like superfamily protein Neighboring gene cyclic nucleotide-gated channel 6 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene early nodulin-like protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_127959.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Class I glutamine amidotransferase-like superfamily protein
NP_179975.1
  • Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10199675..10201095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127959.2 → NP_179975.1  Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179975.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82225
    UniProtKB/TrEMBL
    A0A178VSB6, A0A5S9X0L9, A0A654EVK7
    Conserved Domains (1) summary
    cd01741
    Location:25 → 195
    GATase1_1; Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82225.1

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