U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DUF581 family protein, putative (DUF581) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817110, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
DUF581 family protein, putative (DUF581)
Primary source
TAIR:AT2G25690
Locus tag
AT2G25690
See related
Araport:AT2G25690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3N11.14; F3N11_14
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_003071.7 (10940071..10942454, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SCR-like 17 Neighboring gene miscRNA Neighboring gene SKP1-like 3 Neighboring gene holocarboxylase synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The FCS-like zinc finger scaffold of the kinase SnRK1 is formed by the coordinated actions of the FLZ domain and intrinsically disordered regions. Jamsheer K M, et al. J Biol Chem, 2018 Aug 24. PMID 29945970, Free PMC Article
  2. Expression of Arabidopsis FCS-Like Zinc finger genes is differentially regulated by sugars, cellular energy level, and abiotic stress. Jamsheer K M, et al. Front Plant Sci, 2015. PMID 26442059, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001036338.1
NM_001336010.1
NM_128128.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in response to salt IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to starvation IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
DUF581 family protein, putative (DUF581)
NP_001031415.1
  • Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G11460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_180140.1
  • Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G11460.1); Has 500 Blast hits to 500 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 500; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10940071..10942454 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128128.4 → NP_180140.1  DUF581 family protein, putative (DUF581) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180140.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SL94
    UniProtKB/TrEMBL
    A0A5S9X1N3, A0A654F144
    Conserved Domains (1) summary
    pfam04570
    Location:256 → 307
    zf-FLZ; zinc-finger of the FCS-type, C2-C2

  2. NM_001336010.1 → NP_001323451.1  DUF581 family protein, putative (DUF581) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AX29, A0A5S9X1N3

  3. NM_001036338.1 → NP_001031415.1  DUF581 family protein, putative (DUF581) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031415.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SL94
    UniProtKB/TrEMBL
    A0A5S9X1N3, A0A654F144
    Conserved Domains (1) summary
    pfam04570
    Location:256 → 307
    zf-FLZ; zinc-finger of the FCS-type, C2-C2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SL94.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.