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bZIP transcription factor (DUF630 and DUF632) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817251, updated on 18-Sep-2024

Summary

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Official Full Name
bZIP transcription factor (DUF630 and DUF632)
Primary source
TAIR:AT2G27090
Locus tag
AT2G27090
See related
Araport:AT2G27090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T20P8.14; T20P8_14
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (11567436..11571903, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene response regulator 13 Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene C2H2 zinc-finger protein SERRATE (SE) Neighboring gene FAR1-related sequence 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001336101.1
NM_128267.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
bZIP transcription factor (DUF630 and DUF632)
NP_180277.1
  • Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G39790.1); Has 977 Blast hits to 876 proteins in 150 species: Archae - 2; Bacteria - 21; Metazoa - 160; Fungi - 127; Plants - 553; Viruses - 15; Other Eukaryotes - 99 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11567436..11571903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128267.5 → NP_180277.1  bZIP transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180277.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VN93, Q9ZVD1
    Conserved Domains (2) summary
    pfam04782
    Location:309 → 650
    DUF632; Protein of unknown function (DUF632)
    pfam04783
    Location:1 → 59
    DUF630; Protein of unknown function (DUF630)

  2. NM_001336101.1 → NP_001324823.1  bZIP transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VN93, Q9ZVD1
    Conserved Domains (2) summary
    pfam04782
    Location:309 → 650
    DUF632; Protein of unknown function (DUF632)
    pfam04783
    Location:1 → 59
    DUF630; Protein of unknown function (DUF630)
Nucleotide Protein
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