U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817342, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Primary source
TAIR:AT2G27980
Locus tag
AT2G27980
See related
Araport:AT2G27980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T1E2.10; T1E2_10
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
19
Sequence:
Chromosome: 2; NC_003071.7 (11913359..11920001, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ring/U-Box superfamily protein Neighboring gene cyclin-dependent kinase-subunit 1 Neighboring gene CDK-subunit 2 Neighboring gene BEL1-like homeodomain 8 Neighboring gene chaperonin-60alpha

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_128357.7

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
NP_180365.6
  • Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G36720.1); Has 477 Blast hits to 420 proteins in 59 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 2; Plants - 374; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11913359..11920001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128357.7 → NP_180365.6  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180365.6

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X241, A0A654EWX3, F4IHN9
    Conserved Domains (2) summary
    pfam16135
    Location:599 → 669
    Jas; TPL-binding domain in jasmonate signalling
    cl22851
    Location:697 → 737
    PHD_SF; PHD finger superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools