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6,7-dimethyl-8-ribityllumazine synthase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817573, updated on 18-Sep-2024

Summary

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Official Full Name
6,7-dimethyl-8-ribityllumazine synthase
Primary source
TAIR:AT2G30230
Locus tag
AT2G30230
See related
Araport:AT2G30230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T9D9.4
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (12897054..12898172)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene laccase 3 Neighboring gene GDSL-like Lipase/Acylhydrolase family protein Neighboring gene Cation/hydrogen exchanger family protein Neighboring gene WRKY DNA-binding protein 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Patterns of Sequence and Expression Diversification Associate Members of the PADRE Gene Family With Response to Fungal Pathogens. Didelon M, et al. Front Genet, 2020. PMID 32547597, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128576.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to fungus IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
6,7-dimethyl-8-ribityllumazine synthase
NP_180582.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12897054..12898172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128576.3 → NP_180582.1  6,7-dimethyl-8-ribityllumazine synthase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180582.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSC6, O22919, Q4PST2
    Conserved Domains (1) summary
    pfam14009
    Location:1 → 174
    DUF4228; Domain of unknown function (DUF4228)
Nucleotide Protein
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