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intracellular protein transporter, putative (DUF641) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817772, updated on 18-Sep-2024

Summary

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Official Full Name
intracellular protein transporter, putative (DUF641)
Primary source
TAIR:AT2G32130
Locus tag
AT2G32130
See related
Araport:AT2G32130
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22D22.12; F22D22_12
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (13654805..13655525, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tRNA-Asn Neighboring gene heat-shock protein 70T-2 Neighboring gene transmembrane receptor Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128772.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in negative gravitropism IEA
Inferred from Electronic Annotation
more info
  
involved_in response to red or far red light IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
intracellular protein transporter, putative (DUF641)
NP_180772.1
  • Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT1G29300.1); Has 208 Blast hits to 208 proteins in 30 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13654805..13655525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128772.4 → NP_180772.1  intracellular protein transporter, putative (DUF641) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180772.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VR87, A0A654F8Q5, Q9SKY7
    Conserved Domains (1) summary
    pfam04859
    Location:34 → 153
    DUF641; Plant protein of unknown function (DUF641)
Nucleotide Protein
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