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ARASP chloroplastic membrane metallo proteases [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817809, updated on 18-Sep-2024

Summary

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Official Symbol
ARASP
Official Full Name
chloroplastic membrane metallo proteases
Primary source
TAIR:AT2G32480
Locus tag
AT2G32480
See related
Araport:AT2G32480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS SERIN PROTEASE; T26B15.4; T26B15_4
Summary
Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts.
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Genomic context

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See ARASP in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (13788517..13790077, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene myb domain protein 101 Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A chloroplastic inner envelope membrane protease is essential for plant development. Bölter B, et al. FEBS Lett, 2006 Feb 6. PMID 16413549
  2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_128807.1
NM_201853.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metalloendopeptidase activity TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within chloroplast organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast inner membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
chloroplastic membrane metallo proteases
NP_565745.1
  • ARABIDOPSIS SERIN PROTEASE (ARASP); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, chloroplast organization; LOCATED IN: chloroplast, plastid, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT1G05140.1); Has 10037 Blast hits to 7541 proteins in 2236 species: Archae - 41; Bacteria - 6710; Metazoa - 4; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 3212 (source: NCBI BLink).
NP_973582.1
  • ARABIDOPSIS SERIN PROTEASE (ARASP); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, chloroplast organization; LOCATED IN: chloroplast, plastid, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT1G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13788517..13790077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_201853.2 → NP_973582.1  chloroplastic membrane metallo proteases [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973582.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EGN7, F4ITR5
    Conserved Domains (3) summary
    cd06163
    Location:88 → 399
    S2P-M50_PDZ_RseP-like; RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog ...
    cd00989
    Location:200 → 283
    PDZ_metalloprotease; PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most PDZ ...
    TIGR00054
    Location:84 → 403
    TIGR00054; RIP metalloprotease RseP

  2. NM_128807.1 → NP_565745.1  chloroplastic membrane metallo proteases [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565745.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80885
    UniProtKB/TrEMBL
    A0A178VYQ2, A0A654EY53
    Conserved Domains (1) summary
    TIGR00054
    Location:84 → 440
    TIGR00054; RIP metalloprotease RseP
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80885.1

Gene LinkOut

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