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XID myosin XI D [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817886, updated on 18-Sep-2024

Summary

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Official Symbol
XID
Official Full Name
myosin XI D
Primary source
TAIR:AT2G33240
Locus tag
AT2G33240
See related
Araport:AT2G33240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATXID; F25I18.2; F25I18_2; myosin XI D; MYOSIN XI D
Summary
member of Myosin-like proteins
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Genomic context

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See XID in Genome Data Viewer
Location:
chromosome: 2
Exon count:
42
Sequence:
Chromosome: 2; NC_003071.7 (14086584..14097285, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene GRIM-19 protein Neighboring gene YUCCA 7 Neighboring gene low-molecular-weight cysteine-rich 49 Neighboring gene uncharacterized protein Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence. Reddy AS, et al. Genome Biol, 2001. PMID 11516337, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001336438.1
NM_001336439.1
NM_001336440.1
NM_128883.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
  
enables cytoskeletal motor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within actin filament-based movement TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
myosin XI D
NP_180882.2
  • myosin XI D (XID); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI A (TAIR:AT1G04600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14086584..14097285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336434.1 → NP_001324212.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZD5, A0A7G2EGW4
    Conserved Domains (5) summary
    cd15475
    Location:1274 → 1715
    MyosinXI_CBD; cargo binding domain of myosin XI
    TIGR03490
    Location:1453 → 1542
    Mycoplas_LppA; mycoides cluster lipoprotein, LppA/P72 family
    cd01384
    Location:74 → 718
    MYSc_Myo11; class XI myosin, motor domain
    pfam02736
    Location:9 → 46
    Myosin_N; Myosin N-terminal SH3-like domain
    cl25732
    Location:885 → 1221
    SMC_N; RecF/RecN/SMC N terminal domain

  2. NM_001336435.1 → NP_001324208.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZG5, A0A654EZV0

  3. NM_001336436.1 → NP_001324211.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EZV0

  4. NM_001336437.1 → NP_001324213.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZF2

  5. NM_128883.3 → NP_180882.2  myosin XI D [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180882.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IVR7, Q8RYE8
    UniProtKB/TrEMBL
    A0A654EZV0
    Conserved Domains (7) summary
    smart00242
    Location:76 → 744
    MYSc; Myosin. Large ATPases
    cd15475
    Location:1298 → 1739
    MyosinXI_CBD; cargo binding domain of myosin XI
    cd01384
    Location:92 → 736
    MYSc_Myo11; class XI myosin, motor domain
    pfam02736
    Location:28 → 64
    Myosin_N; Myosin N-terminal SH3-like domain
    pfam08202
    Location:987 → 1241
    MIS13; Mis12-Mtw1 protein family
    pfam12718
    Location:926 → 1068
    Tropomyosin_1; Tropomyosin like
    pfam15898
    Location:937 → 1023
    PRKG1_interact; cGMP-dependent protein kinase interacting domain

  6. NM_001336438.1 → NP_001324210.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VNQ2, A0A1P8AZF4

  7. NM_001336439.1 → NP_001324209.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZE5, A0A654EZV0

  8. NM_001336440.1 → NP_001324214.1  myosin XI D [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AZE5, A0A654EZV0
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4IVR7.1

Gene LinkOut

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