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VQ motif-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817945, updated on 18-Sep-2024

Summary

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Official Full Name
VQ motif-containing protein
Primary source
TAIR:AT2G33780
Locus tag
AT2G33780
See related
Araport:AT2G33780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MPK3/6-targeted VQP 2; MVQ2; T1B8.28; T1B8_28
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (14290969..14291806, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ralf-like 19 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene arabinogalactan protein 30

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis VQ motif-containing proteins VQ12 and VQ29 negatively modulate basal defense against Botrytis cinerea. Wang H, et al. Sci Rep, 2015 Sep 23. PMID 26394921, Free PMC Article
  2. Structural and functional analysis of VQ motif-containing proteins in Arabidopsis as interacting proteins of WRKY transcription factors. Cheng Y, et al. Plant Physiol, 2012 Jun. PMID 22535423, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_128937.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
VQ motif-containing protein
NP_180934.1
  • VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G28280.1); Has 158 Blast hits to 158 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 2; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14290969..14291806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128937.3 → NP_180934.1  VQ motif-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180934.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23660, Q8L8C3
    UniProtKB/TrEMBL
    A0A654EYJ3, A0A7G2EE73
    Conserved Domains (1) summary
    pfam05678
    Location:33 → 60
    VQ; VQ motif
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23660.1

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