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Ribosomal protein L11 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818295, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L11 family protein
Primary source
TAIR:AT2G37190
Locus tag
AT2G37190
See related
Araport:AT2G37190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T2N18.5; T2N18_5
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (15619206..15620156, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene plasma membrane intrinsic protein 2 Neighboring gene Aquaporin-like superfamily protein Neighboring gene acyl-CoA-binding domain protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene lysine decarboxylase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The 14-3-3 isoforms chi and epsilon differentially bind client proteins from developing Arabidopsis seed. Swatek KN, et al. J Proteome Res, 2011 Sep 2. PMID 21766784
  2. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981
  3. Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Bae MS, et al. Plant J, 2003 Dec. PMID 14617066
  4. Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. Tan YF, et al. Plant Physiol, 2010 Feb. PMID 20018591, Free PMC Article
  5. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_129275.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables zinc ion binding HDA PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in chloroplast HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
part_of cytosolic large ribosomal subunit HDA PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
located_in nucleolus HDA PubMed 
located_in nucleus HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein L11 family protein
NP_181256.1
  • Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome, zinc ion binding; INVOLVED IN: response to cold, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1580 Blast hits to 1580 proteins in 592 species: Archae - 303; Bacteria - 410; Metazoa - 359; Fungi - 167; Plants - 131; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15619206..15620156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129275.3 → NP_181256.1  Ribosomal protein L11 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181256.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P50883, Q9ZQD3
    UniProtKB/TrEMBL
    A0A178VR43, A0A5S9X4S3
    Conserved Domains (1) summary
    PLN03072
    Location:1 → 166
    PLN03072; 60S ribosomal protein L12; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P50883.2

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