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weak chloroplast movement under blue light protein (DUF827) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818418, updated on 18-Sep-2024

Summary

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Official Full Name
weak chloroplast movement under blue light protein (DUF827)
Primary source
TAIR:AT2G38370
Locus tag
AT2G38370
See related
Araport:AT2G38370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T19C21.14; T19C21_14
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (16071979..16074917, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene uncharacterized protein Neighboring gene prenylated RAB acceptor 1.B4 Neighboring gene endonuclease/glycosyl hydrolase Neighboring gene Peroxidase superfamily protein Neighboring gene Peroxidase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_129393.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
weak chloroplast movement under blue light protein (DUF827)
NP_181371.2
  • Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G51720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16071979..16074917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336697.1 → NP_001323454.1  weak chloroplast movement under blue light protein (DUF827) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AX38, A0A5S9X533

  2. NM_129393.5 → NP_181371.2  weak chloroplast movement under blue light protein (DUF827) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181371.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4ISY0, O80914
    UniProtKB/TrEMBL
    A0A5S9X533, A0A654F1D4
    Conserved Domains (1) summary
    pfam05701
    Location:107 → 379
    WEMBL; Weak chloroplast movement under blue light
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4ISY0.1

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