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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818473, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT2G38890
Locus tag
AT2G38890
See related
Araport:AT2G38890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T7F6.6; T7F6_6
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (16241077..16242917)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Serine protease inhibitor, potato inhibitor I-type family protein Neighboring gene nuclear factor Y, subunit B1 Neighboring gene ncRNA Neighboring gene Serine protease inhibitor, potato inhibitor I-type family protein Neighboring gene Low temperature and salt responsive protein family Neighboring gene calcium-dependent protein kinase 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_129446.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001189706.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown.
NP_181423.2
  • unknown protein; Has 58 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16241077..16242917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336745.1 → NP_001324558.1  uncharacterized protein AT2G38890 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0G6, A0A5S9X591

  2. NM_001202777.1 → NP_001189706.1  uncharacterized protein AT2G38890 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189706.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSM3, F4ITZ8

  3. NM_001336746.1 → NP_001324559.1  uncharacterized protein AT2G38890 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSM3, Q9ZV17

  4. NM_129446.2 → NP_181423.2  uncharacterized protein AT2G38890 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181423.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSM3, F4ITZ9
Nucleotide Protein
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