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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818506, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT2G39210
Locus tag
AT2G39210
See related
Araport:AT2G39210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16B24.15; T16B24_15
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (16366102..16368570, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene CRINKLY4 related 2 Neighboring gene Protein kinase superfamily protein Neighboring gene Seven transmembrane MLO family protein Neighboring gene PATATIN-like protein 6 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis PIC30 encodes a major facilitator superfamily transporter responsible for the uptake of picolinate herbicides. Kathare PK, et al. Plant J, 2020 Apr. PMID 31710151
  2. An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease. Hok S, et al. Plant Cell Environ, 2011 Nov. PMID 21711359
  3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_129479.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within inorganic ion import across plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to oomycetes IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_181454.1
  • Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16366102..16368570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129479.3 → NP_181454.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181454.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X5C2, A0A654F1J3, O80960
    Conserved Domains (1) summary
    cd17354
    Location:20 → 541
    MFS_Mch1p_like; Monocarboxylate transporter-homologous (Mch) 1 protein and similar transporters of the Major Facilitator Superfamily of transporters
Nucleotide Protein
Heading Accession and Version

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