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S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818620, updated on 18-Sep-2024

Summary

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Official Full Name
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Primary source
TAIR:AT2G40280
Locus tag
AT2G40280
See related
Araport:AT2G40280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T7M7.24
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (16825495..16828505, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Protein kinase family protein Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 2 subunit 1 Neighboring gene ferritin 4 Neighboring gene Pectin lyase-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
  2. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  3. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_129586.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi cis cisterna HDA PubMed 
located_in endosome HDA PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in trans-Golgi network HDA PubMed 

General protein information

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Preferred Names
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NP_565926.1
  • S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56080.1); Has 1258 Blast hits to 1230 proteins in 178 species: Archae - 2; Bacteria - 211; Metazoa - 31; Fungi - 46; Plants - 944; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16825495..16828505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129586.3 → NP_565926.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565926.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SIZ3, Q9XEF5
    UniProtKB/TrEMBL
    A0A7G2EG83
    Conserved Domains (2) summary
    pfam03141
    Location:90 → 578
    Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
    pfam08241
    Location:209 → 303
    Methyltransf_11; Methyltransferase domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SIZ3.2

Gene LinkOut

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