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protein kinase family protein / protein phosphatase 2C (PP2C) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818684, updated on 18-Sep-2024

Summary

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Official Full Name
protein kinase family protein / protein phosphatase 2C (PP2C) family protein
Primary source
TAIR:AT2G40860
Locus tag
AT2G40860
See related
Araport:AT2G40860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T20B5.6; T20B5_6
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Sequence:
Chromosome: 2; NC_003071.7 (17053498..17057326, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RING-H2 finger C1A Neighboring gene disproportionating enzyme 2 Neighboring gene phosphoinositide 4-kinase gamma 1 Neighboring gene cytochrome P450, family 98, subfamily A, polypeptide 3 Neighboring gene cystatin A Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Arabidopsis VTC3 as a putative and unique dual function protein kinase::protein phosphatase involved in the regulation of the ascorbic acid pool in plants. Conklin PL, et al. J Exp Bot, 2013 Jul. PMID 23749562
  2. Identification of ascorbic acid-deficient Arabidopsis thaliana mutants. Conklin PL, et al. Genetics, 2000 Feb. PMID 10655235, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. VTC3(AT2G40860} is a dual function protein kinase::protein phosphatase involved in the regulation of the ascorbic acid.
    Title: Identification of Arabidopsis VTC3 as a putative and unique dual function protein kinase::protein phosphatase involved in the regulation of the ascorbic acid pool in plants.
Submit: New GeneRIF Correction

General gene information

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NM_001336874.1
NM_001336875.1
NM_180005.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within L-ascorbic acid metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
protein kinase family protein / protein phosphatase 2C (PP2C) family protein
NP_850336.1
  • protein kinase family protein / protein phosphatase 2C (PP2C) family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 131448 Blast hits to 130118 proteins in 4510 species: Archae - 166; Bacteria - 15372; Metazoa - 47633; Fungi - 11848; Plants - 35207; Viruses - 642; Other Eukaryotes - 20580 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17053498..17057326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336873.1 → NP_001325403.1  protein kinase family protein / protein phosphatase 2C (PP2C) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B344, A0A5S9X6E3

  2. NM_180005.4 → NP_850336.1  protein kinase family protein / protein phosphatase 2C (PP2C) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850336.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22200, O22201, Q940A2
    UniProtKB/TrEMBL
    A0A5S9X6E3
    Conserved Domains (3) summary
    smart00220
    Location:30 → 307
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd00143
    Location:391 → 648
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
    cl21453
    Location:36 → 311
    PKc_like; Protein Kinases, catalytic domain

  3. NM_001336874.1 → NP_001325402.1  protein kinase family protein / protein phosphatase 2C (PP2C) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B342, A0A5S9X6E3

  4. NM_001336875.1 → NP_001325404.1  protein kinase family protein / protein phosphatase 2C (PP2C) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B331, A0A5S9X6E3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q940A2.1

Gene LinkOut

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