U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819015, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Ankyrin repeat family protein
Primary source
TAIR:AT2G44090
Locus tag
AT2G44090
See related
Araport:AT2G44090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6E13.22
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (18238269..18241410, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L2 family Neighboring gene NagB/RpiA/CoA transferase-like superfamily protein Neighboring gene ARGOS-like protein Neighboring gene ncRNA Neighboring gene guanosine nucleotide diphosphate dissociation inhibitor 1 Neighboring gene Seven transmembrane MLO family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001036460.2
NM_001337072.1
NM_001337074.1
NM_129972.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Ankyrin repeat family protein
NP_001031537.1
  • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G59910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_566008.1
  • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G59910.1); Has 93 Blast hits to 93 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 66; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    18238269..18241410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337073.1 → NP_001324773.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B199
    Conserved Domains (2) summary
    sd00045
    Location:158 → 184
    ANK; ANK repeat [structural motif]
    cl39094
    Location:162 → 239
    Ank_2; Ankyrin repeats (3 copies)

  2. NM_129972.4 → NP_566008.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566008.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYZ3, A0A384KCN1, O80579, Q94AD7
    Conserved Domains (3) summary
    sd00045
    Location:294 → 320
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:298 → 375
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:355 → 437
    Ank_2; Ankyrin repeats (3 copies)

  3. NM_001337072.1 → NP_001324775.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B199
    Conserved Domains (2) summary
    sd00045
    Location:158 → 184
    ANK; ANK repeat [structural motif]
    cl39094
    Location:162 → 239
    Ank_2; Ankyrin repeats (3 copies)

  4. NM_001036460.2 → NP_001031537.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031537.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYZ3, A0A384KCN1, O80579, Q94AD7
    Conserved Domains (3) summary
    sd00045
    Location:294 → 320
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:298 → 375
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:355 → 437
    Ank_2; Ankyrin repeats (3 copies)

  5. NM_001337074.1 → NP_001324774.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYZ3, A0A384KCN1, O80579, Q94AD7
    Conserved Domains (3) summary
    sd00045
    Location:294 → 320
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:298 → 375
    Ank_2; Ankyrin repeats (3 copies)
    cl39094
    Location:355 → 437
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools