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myosin-4 protein (DUF641) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819134, updated on 18-Sep-2024

Summary

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Official Full Name
myosin-4 protein (DUF641)
Primary source
TAIR:AT2G45260
Locus tag
AT2G45260
See related
Araport:AT2G45260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4L23.23
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (18664390..18666475, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene miscRNA Neighboring gene glycoprotease 1 Neighboring gene RAS associated with diabetes protein 51C Neighboring gene Transketolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. COST1 regulates autophagy to control plant drought tolerance. Bao Y, et al. Proc Natl Acad Sci U S A, 2020 Mar 31. PMID 32170020, Free PMC Article
  2. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_130089.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative gravitropism IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within negative regulation of autophagy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to red or far red light IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in autophagosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
myosin-4 protein (DUF641)
NP_182051.1
  • Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    18664390..18666475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130089.4 → NP_182051.1  myosin-4 protein (DUF641) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_182051.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VT59, O22146
    Conserved Domains (1) summary
    pfam04859
    Location:31 → 158
    DUF641; Plant protein of unknown function (DUF641)
Nucleotide Protein
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