U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPa3 pyrophosphorylase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819299, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
PPa3
Official Full Name
pyrophosphorylase 3
Primary source
TAIR:AT2G46860
Locus tag
AT2G46860
See related
Araport:AT2G46860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtPPa3; F19D11.23; F19D11_23; pyrophosphorylase 3
Summary
Encodes a protein that might have inorganic pyrophosphatase activity.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PPa3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (19253670..19255328)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DOMAIN OF UNKNOWN FUNCTION 724 4) Neighboring gene Protein kinase superfamily protein Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of an Arabidopsis inorganic pyrophosphatase capable of being imported into chloroplasts. Schulze S, et al. FEBS Lett, 2004 May 7. PMID 15135060
  2. Vacuolar H(+)-Pyrophosphatase and Cytosolic Soluble Pyrophosphatases Cooperatively Regulate Pyrophosphate Levels in Arabidopsis thaliana. Segami S, et al. Plant Cell, 2018 May. PMID 29691313, Free PMC Article
  3. Virus-induced gene silencing of plastidial soluble inorganic pyrophosphatase impairs essential leaf anabolic pathways and reduces drought stress tolerance in Nicotiana benthamiana. George GM, et al. Plant Physiol, 2010 Sep. PMID 20605913, Free PMC Article
  4. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_130253.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables inorganic diphosphate phosphatase activity NAS
Non-traceable Author Statement
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in phosphate-containing compound metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pyrophosphorylase 3
NP_182209.1
  • pyrophosphorylase 3 (PPa3); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: phosphate metabolic process, metabolic process; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 1 (TAIR:AT1G01050.1); Has 5975 Blast hits to 5975 proteins in 1836 species: Archae - 171; Bacteria - 4302; Metazoa - 246; Fungi - 260; Plants - 270; Viruses - 0; Other Eukaryotes - 726 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    19253670..19255328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130253.3 → NP_182209.1  pyrophosphorylase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_182209.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82793, Q8GXR0
    UniProtKB/TrEMBL
    A0A178VZ15, A0A5S9X8E0
    Conserved Domains (1) summary
    PLN02373
    Location:29 → 216
    PLN02373; soluble inorganic pyrophosphatase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82793.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools