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O-fucosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819696, updated on 18-Sep-2024

Summary

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Official Full Name
O-fucosyltransferase family protein
Primary source
TAIR:AT3G05320
Locus tag
AT3G05320
See related
Araport:AT3G05320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T12H1.29; T12H1_29
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (1513062..1515568, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene peroxisomal adenine nucleotide carrier 1 Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene MIRO-related GTP-ase 3 Neighboring gene Cyclin family protein Neighboring gene cyclin family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Putative Protein O-Fucosyltransferase Facilitates Pollen Tube Penetration through the Stigma-Style Interface. Smith DK, et al. Plant Physiol, 2018 Apr. PMID 29467178, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results indicate that O-FUCOSYLTRANSFERASE1 (AtOFT1) mutant pollen tubes have a reduced ability to penetrate the stigma-style interface.
    Title: A Putative Protein O-Fucosyltransferase Facilitates Pollen Tube Penetration through the Stigma-Style Interface.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_111405.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in pollen-pistil interaction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within pollination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
colocalizes_with Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
O-fucosyltransferase family protein
NP_187183.3
  • O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1513062..1515568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337578.1 → NP_001327824.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H0U6, Q9MA87
    UniProtKB/TrEMBL
    A0A178VJL4, A0A5S9X9L3
    Conserved Domains (1) summary
    cd11296
    Location:69 → 384
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  2. NM_001337577.1 → NP_001327823.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H0U6, Q9MA87
    UniProtKB/TrEMBL
    A0A178VJL4, A0A5S9X9L3
    Conserved Domains (1) summary
    cd11296
    Location:69 → 384
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  3. NM_111405.4 → NP_187183.3  O-fucosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187183.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H0U6, Q9MA87
    UniProtKB/TrEMBL
    A0A178VJL4, A0A5S9X9L3
    Conserved Domains (1) summary
    cd11296
    Location:69 → 384
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MA87.1

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