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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819704, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT3G05400
Locus tag
AT3G05400
See related
Araport:AT3G05400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22F7.16; F22F7_16
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Genomic context

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Location:
chromosome: 3
Exon count:
17
Sequence:
Chromosome: 3; NC_003074.8 (1549446..1554219)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ALWAYS EARLY 2 Neighboring gene ncRNA Neighboring gene S-adenosyl-L-methionine-dependent methyltransferase Neighboring gene Photosystem II reaction center PsbP family protein Neighboring gene pseudo Neighboring gene acyl-CoA binding protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001202885.1
NM_111413.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_001189814.1
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G27350.1).
NP_187191.2
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G27350.1); Has 24275 Blast hits to 23828 proteins in 1815 species: Archae - 445; Bacteria - 9241; Metazoa - 4940; Fungi - 6177; Plants - 2315; Viruses - 0; Other Eukaryotes - 1157 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1549446..1554219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111413.5 → NP_187191.2  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187191.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8VZT3, Q9MA53, Q9SCW6
    UniProtKB/TrEMBL
    A0A5S9X9M3, A0A654F5Q4
    Conserved Domains (2) summary
    cd06174
    Location:30 → 444
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:30 → 459
    Sugar_tr; Sugar (and other) transporter

  2. NM_001202885.1 → NP_001189814.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189814.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X9M3, A0A654F5Q4, F4J7A6
    Conserved Domains (2) summary
    cd06174
    Location:30 → 424
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:30 → 439
    Sugar_tr; Sugar (and other) transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8VZT3.1

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