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Actin-binding FH2 (formin homology 2) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819712, updated on 18-Sep-2024

Summary

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Official Full Name
Actin-binding FH2 (formin homology 2) family protein
Primary source
TAIR:AT3G05470
Locus tag
AT3G05470
See related
Araport:AT3G05470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22F7.8; F22F7_8
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (1579419..1583073, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene sporozoite surface protein-like protein Neighboring gene cell cycle checkpoint control protein family Neighboring gene ralf-like 22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Formin homology 2 domains occur in multiple contexts in angiosperms. Cvrcková F, et al. BMC Genomics, 2004 Jul 15. PMID 15256004, Free PMC Article
  2. Formins: intermediates in signal-transduction cascades that affect cytoskeletal reorganization. Deeks MJ, et al. Trends Plant Sci, 2002 Nov. PMID 12417149
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_111420.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables actin binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in actin nucleation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Actin-binding FH2 (formin homology 2) family protein
NP_187198.1
  • Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homolog 6 (TAIR:AT5G67470.1); Has 5495 Blast hits to 4819 proteins in 357 species: Archae - 2; Bacteria - 168; Metazoa - 2550; Fungi - 658; Plants - 1088; Viruses - 235; Other Eukaryotes - 794 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1579419..1583073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111420.2 → NP_187198.1  Actin-binding FH2 (formin homology 2) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187198.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9MA60
    UniProtKB/TrEMBL
    A0A178VCE3, A0A5S9X9E1, A0A654F4B0
    Conserved Domains (1) summary
    pfam02181
    Location:462 → 862
    FH2; Formin Homology 2 Domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MA60.1

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