Rubisco methyltransferase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Rubisco methyltransferase family protein
Primary source: TAIR:AT3G07670
Locus tag: AT3G07670
See related: Araport:AT3G07670
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 12

Sequence:: Chromosome: 3; NC_003074.8 (2451564..2455100)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001337727.1

Supported by ESTs:

NM_111646.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	IEA Inferred from Electronic Annotation more info
enables protein-lysine N-methyltransferase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chloroplast	IEA Inferred from Electronic Annotation more info
located_in chloroplast	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Rubisco methyltransferase family protein

NP_187424.1

Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

2451564..2455100

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_111646.3 → NP_187424.1 Rubisco methyltransferase family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_187424.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VIC2, A0A384KCR9, A0A654F534, Q9S7D2

Conserved Domains (2) summary

cd19179
Location:84 → 319

SET_RBCMT; SET domain found in chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (RBCMT) and similar proteins

pfam09273
Location:343 → 471

Rubis-subs-bind; Rubisco LSMT substrate-binding
NM_001337727.1 → NP_001325677.1 Rubisco methyltransferase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1I9LLZ4