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SCPL7 serine carboxypeptidase-like 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820209, updated on 18-Sep-2024

Summary

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Official Symbol
SCPL7
Official Full Name
serine carboxypeptidase-like 7
Primary source
TAIR:AT3G10450
Locus tag
AT3G10450
See related
Araport:AT3G10450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
serine carboxypeptidase-like 7
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Genomic context

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See SCPL7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Sequence:
Chromosome: 3; NC_003074.8 (3249513..3252582)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Shugoshin C terminus Neighboring gene plant self-incompatibility protein S1 family protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_001035592.2
NM_001337877.1
NM_111880.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
serine carboxypeptidase-like 7
NP_001030669.1
  • serine carboxypeptidase-like 7 (SCPL7); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 2 (TAIR:AT1G73300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_187656.1
  • serine carboxypeptidase-like 7 (SCPL7); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 3 (TAIR:AT1G73280.1); Has 3991 Blast hits to 3892 proteins in 459 species: Archae - 0; Bacteria - 494; Metazoa - 641; Fungi - 841; Plants - 1583; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3249513..3252582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337876.1 → NP_001325521.1  serine carboxypeptidase-like 7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LLH5, A0A654FB14

  2. NM_001035592.2 → NP_001030669.1  serine carboxypeptidase-like 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030669.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FB14, F4J3S3
    Conserved Domains (1) summary
    cl08270
    Location:4 → 394
    Peptidase_S10; Serine carboxypeptidase

  3. NM_001337877.1 → NP_001325520.1  serine carboxypeptidase-like 7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V9Y2, A0A1I9LLH4, A0A384KB05, A0A654FB14

  4. NM_111880.5 → NP_187656.1  serine carboxypeptidase-like 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187656.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SQX6
    UniProtKB/TrEMBL
    A0A178VAE4, A0A5S9XBE8, A0A654FB14
    Conserved Domains (1) summary
    cl08270
    Location:25 → 437
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SQX6.1

Gene LinkOut

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